Domine Database

DOMINE

Content
Description	comprehensive collection of known and predicted domain-domain interactions.
Contact
Research center	National Institute of Environmental Health Sciences, National Institutes of Health
Laboratory	Biostatistics Branch
Primary Citation	Yellaboina & al. (2011)[1]
Release date	2010
Access
Website	http://domine.utdallas.edu
Tools
Miscellaneous

DOMINE is a free and publicly available database of known and predicted protein domain interactions (or domain-domain interactions). It contains interactions observed in PDB crystal structures, and those predicted by several computational approaches. DOMINE uses Pfam HMM profiles for protein domain definitions. The DOMINE database contains 20,513 interactions among 4,036 domains), which includes 4,349 known interactions inferred from PDB structure data.

References

1. ^ Yellaboina, Sailu; Tasneem Asba, Zaykin Dmitri V, Raghavachari Balaji, Jothi Raja (Jan 2011). "DOMINE: a comprehensive collection of known and predicted domain-domain interactions" (in eng). Nucleic Acids Res. (England) 39 (Database issue): D730-5. doi:10.1093/nar/gkq1229. PMC 3013741. PMID 21113022. http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3013741. 

See also

• DOMINE database