MUSCLE


MUSCLE

MUSCLE (multiple sequence comparison by log-expectation) is public domain, multiple sequence alignment software for protein and nucleotide sequences.cite journal |author=Edgar RC |title=MUSCLE: multiple sequence alignment with high accuracy and high throughput |journal=Nucleic Acids Research |volume=32 |issue=5 |pages=1792–97 |year=2004 |doi=10.1093/nar/gkh340 |pmid=15034147] cite journal |author=Edgar RC |title=MUSCLE: a multiple sequence alignment method with reduced time and space complexity |journal=BMC Bioinformatics |volume=5 |issue=1 |pages=113 |year=2004 |doi=10.1186/1471-2105-5-113]

MUSCLE is integrated into UGENE bioinformatics tool as a plugin.

ee also

*Sequence alignment software
*Clustal
*ProbCons
*AMAP
*T-Coffee

References

External links

* [http://www.drive5.com/muscle/ Official website]
* [http://phylogenomics.berkeley.edu/muscle/muscle_form.html MUSCLE Web Server]


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