Stony Brook

Stony Brook may refer to:

Massachusetts:
* Stony Brook, a tributary of the Charles River in Boston
* Stony Brook (MBTA station) on the Orange Line in Jamaica Plain
* Stony Brook (B&M station), a former Boston and Maine Railroad station in Weston

New Hampshire:
* Stony Brook (Souhegan River), a tributary of the Souhegan River in southern New Hampshire

New Jersey:
* Stony Brook (Green Brook), a tributary of Green Brook in central New Jersey
* Stony Brook (Millstone River), a tributary of the Millstone River in Mercer County
** Stony Brook Millstone Watershed Arboretum, an arboretum in Pennington, Mercer County
* Stony Brook Meeting House and Cemetery, historic Quaker sites in Princeton Township, Mercer County

New York:
* Stony Brook, New York, a hamlet on Long Island
** State University of New York at Stony Brook, a public university in Stony Brook
***Stony Brook University Hospital, part of the State University of New York at Stony Brook
*** Stony Brook Sports Complex, a multi-purpose arena in Stony Brook
***Stony Brook Film Festival, a film festival held at the State University of New York at Stony Brook
***The Stony Brook Press, a biweekly, student-run newspaper at the State University of New York at Stony Brook
***The Stony Brook Statesman, a student newspaper serving the State University of New York at Stony Brook
** Stony Brook School, a Christian private school in Stony Brook
* Stony Brook State Park, a park in Dansville

Pennsylvania:
*Stony Brook (Pennsylvania), a tributary of Mehoopany Creek